Department of Animal Sciences

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Browsing Department of Animal Sciences by browse.metadata.advisor "Banga, C. B."

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    Economic value and genetic prediction of clinical mastitis in South African Holstein cattle
    (Stellenbosch : Stellenbosch University, 2014-04) Man'ombe, Edson; Dzama, Kennedy; Banga, C. B.; Stellenbosch University. Faculty of AgriSciences. Dept. of Animal Sciences.
    ENGLISH ABSTRACT: Mastitis is the most prevalent and costly production disease of dairy cattle; hence mastitis incidence is a distinctly important trait in dairy cattle. The primary objective of the study was to determine the economic value, and develop a model for genetic prediction of clinical mastitis in South African Holstein cattle. These procedures are a prerequisite to including this trait in the breeding objective. The cost of clinical mastitis per incident was calculated as the sum of revenue loss due to discarded milk during the infection period and the associated treatment costs. Economic value (ZAR/incident) was calculated as the change in profit (increase in costs) resulting from a simulated marginal increase in mastitis incidence in an average herd. Average economic losses due to clinical mastitis were estimated at ZAR919.96/cow/year and the average incidence was 0.9cases/cow/year. The economic value of clinical mastitis was ‐ZAR1079.51/incident. A model for predicting estimated breeding values (EBVs) for clinical mastitis using somatic cell score (SCS), fore teat length (FTL), udder depth (UD) and rear udder height (RUH) was developed, using genetic (co)variances among these traits. Since EBVs for SCS, FTL, UD and RUH are routinely estimated under the national genetic evaluation programme, EBVs for clinical mastitis can be predicted from the model developed in the current study. Thus, the results of the study provide the basis for including clinical mastitis in the breeding objective for South African Holstein cattle.
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    Genetic evaluation of functional longevity in South African Holstein cattle using a proportional hazards model
    (Stellenbosch : Stellenbosch University, 2015-12) Imbayarwo-Chikosi, Venancio Edward; Dzama, Kennedy; Banga, C. B.; Halimani, T. E.; Stellenbosch University. Faculty of Agrisciences. Dept. of Animal Sciences.
    ENGLISH ABSTRACT: Improvement and selection of superior animals for longevity is a viable complimentary strategy for increasing functional longevity of Holstein dairy cattle. Genetic evaluation of animals for functional longevity is a prerequisite for improvement of the trait. This study was carried out to determine non-genetic factors that influence functional longevity in South African Holstein cattle, as well as to estimate genetic parameters for functional longevity, estimate sire breeding values, and to establish the contribution of conformation traits to the risk of cows being culled from dairy herds. Analyses were carried out using records of 166 222 daughters of 2 051 sires from 1 545 herds in six regions of South Africa. The regions were the Western Cape, Eastern Cape, Northern Cape, Free State, Kwa-Zulu Natal and the combined Gauteng & North Western Provinces. Data were analysed using a piecewise Weibull sire-maternal grandsire model in which the baseline hazard was assumed to change at 270 and 380 days in milk as well as at drying-off. The fixed effects model comprised of the time-independent effect of age at first calving, the combined time-dependent effects of region x year of calving, number of lactations x within-herd milk production class, year of calving x within-herd protein and year of calving x fat percentage production class. Model also had the combined time-dependent effect of herd size x annual herd size change. The random herd-year and sire effects were later included in the model for the estimation of sire and herd-year variance components. Analyses indicated a decline in the survival function, an indicator of functional longevity, among cows that calved for the first time in 2000, 2004 and 2008. Cows that delivered their first calf in 2000 had better survival functions that those that calved for the first time in 2004 and 2008. All fitted effects significantly contributed to the risk of a cow being culled from a herd. Within-herd milk production made the largest contribution to the risk of a cow being culled from a herd. Survival was best in the Northern Cape and worst in Eastern Cape. The risk of being culled was the highest for cows in the second stage of lactation (271- 380 days), when the entire lactation period was considered. High producing cows were more likely not to be culled from a herd than poor producing cows. Cows were more likely to be culled for low protein production percentage than within-herd fat production percentage. The risk of being culled was low for heifers calving at 20 to 25 months of age. The higher risk of culling among cows with multiple lactations indicated the culling policy of dairy farmers to retain a higher number of younger cows than older cows in herds. A decrease in herd size was indicative of a high culling rate. Effective heritability was 0.109. Breeding values ranged from 2.12 for the best cows to -4.80 for the worst cows. This implied that the best and the worst cows were 2.12 times and 4.80 more likely to be culled from herds than the average cow respectively. Genetic trends for functional longevity indicated a marginal decline in sire estimated breeding values. This corresponded with the phenotypic decline in the survivor function observed in cows that calved in 200, 2004 and 2008. All udder, rump, body, feet and leg type traits, with the exception of rear leg side, significantly influenced functional longevity. Farmers culled cows mainly of extremely poor type with a tendency to retain animals with poor to very good structure. Udder traits contributed the most to the risk of a cow being culled. Cows were more likely to be culled for poor scores received for rear teat placement, rear udder height and fore udder attachment, than for any of the other conformation type traits. The contribution of angularity to the risk of being culled was also high, indicating a preference for highly angular bodied cows. Conformation type traits can therefore be used as indicator traits for functional longevity in Holstein cattle, especially when selection and culling is done based on very poor scores for udder traits. The study indicated that genetic improvement in functional longevity can be achieved with the evaluation and selection of dairy sires. There is therefore a wide scope for including functional longevity in the selection objectives for South African Holstein cattle. There is a need to develop appropriate models to ensure that the national dairy industry can benefit from using a Weibull piecewise model.